Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs10975785 chr9:6712059 T/A 2.52E-5 520 41 41.47 20.67 KM Plot
KIRC rs10975786 chr9:6712108 A/C 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975787 chr9:6712142 A/C 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975788 chr9:6712164 G/T 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs10975789 chr9:6712314 A/C 7.19E-5 527 40.57 41.47 29.77 KM Plot
KIRC rs10975793 chr9:6713448 C/T 7.76E-6 518 40.78 42.67 19.68 KM Plot
KIRC rs10975794 chr9:6713527 T/A 7.78E-6 515 41 42.67 19.68 KM Plot
KIRC rs10975795 chr9:6713856 C/T 7.49E-6 519 40.57 42.67 19.68 KM Plot
KIRC rs10975796 chr9:6713942 C/T 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs10975797 chr9:6713987 C/T 3.31E-5 516 40.28 42.33 20.67 KM Plot
KIRC rs10975798 chr9:6714038 A/G 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs10975799 chr9:6714113 G/T 3.49E-5 516 40.78 42.33 20.67 KM Plot
KIRC rs10975800 chr9:6715453 G/A 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs10975801 chr9:6715564 T/C 3.22E-5 519 40 43 20.67 KM Plot
KIRC rs11045232 chr12:20574818 A/G 3.69E-7 527 3.37 49.97 37.9 KM Plot